2024

Wang, X.1, Pan, W.1, Sun, C.1, Yang, H.1, Cheng, Z.1, Yan, F., Ma, G.,Shang, Y., Zhang R., Gao, C.*, Liu, L.*, Zhang, H.* (2024). Creating large‑scale genetic diversity in Arabidopsis via base editing‑mediated deepartificial evolution. Genome Biology, 25, 215.

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Li, B.1, Sun, C.1, Li, J., Gao, C.* (2024). Targeted genome-modification tools and their advanced applications in crop breeding. Nature Reviews Genetics, 25, 603-622.

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Liu, ZX.1, Zhang, S.1, Zhu, HZ.1, Chen, ZH.1, Yang, Y.1, Li, LQ.1, Lei, Y., Liu, Y., Li, DY., Sun, A., Li, CP., Tan, SQ., Wang, GL., Shen,JY.,  Jin, S., Gao, C., Liu, JJ.* (2024). Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage. Science, 383, 495.

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Liang, R.1, He, Z.1, Zhao, KT.1, Zhu, H., Hu, J., Liu, G., Gao, Q., Liu, M., Zhang, R., Qiu, JL., Gao, C.* (2024). Prime editing using CRISPR-Cas12a and circular RNAs in human cells. Nature Biotechnology, doi: 10.1038/s41587-023-02095-x.

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Liang, R., Gao, C.* (2024). Creating one-line hybrid crops by synthetic apomixes. Molecular Plant, 17, 1–3.

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2023

Zou, J., Huang, Y., Gao, C., Wang, K. (2023). Unlocking crop diversity: enhancing variations through genome editing.Science Bulletin doi: https://doi.org/10.1016/j.scib.2023.12.013.

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Hu, J., Sun, Y., Li, B., Liu, Z., Wang, Z., Gao, Q., Guo, M., Liu, G., Zhao, K., Gao, C. (2023). Strand-preferred base editing of organellar and nuclear genomes using CyDENT. Nature Biotechnologydoi: 10.1038/s41587-023-01910-9.

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Huang, J., Lin, Q., Fei, H., He, Z., Xu, H., Li, Y., Qu, K., Han, P., Gao, Q., Li, B. et al. (2023). Discovery of deaminase functions by structure-based protein clustering. Cell 186, 3182-3195.

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Xue, C., Gao, C. (2023). Engineered upstream open reading frames predictably downregulate mRNA translation in plants. Nature Biotechnology 41, 1694–1695.

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Zhang, X.E., Liu, C., Dai, J., Yuan, Y., Gao, C., Feng, Y., Wu, B., Wei, P., You, C., Wang, X., et al. (2023). Enabling technology and core theory of synthetic biology. Science China Life Sciences 66, 1742-1785.

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Jin, S., Lin, Q., Gao, Q., and Gao, C. (2023). Optimized prime editing in monocot plants using PlantPegDesigner and engineered plant prime editors (ePPEs). Nature Protocol 18, 831-853.

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Hu, J., Gao, C. (2023) CRISPR-edited plants by grafting. Nature biotechnology 41, 909–910.

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2022

Gao, C., Kikulwe, E., Kuzma, J., Lema, M., Lidder, P., Robinson, J., Wessler, J., and Zhao, K. (2022). Gene editing and agrifood systems. United Nations Food and Agriculture Organization (FAO) doi: 10.4060/cc3579en.

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Xu, F., Tang, J., Wang, S., Cheng, X., Wang, H., Ou, S., Gao, S., Li, B., Qian, Y., Gao, C., et al. (2022). Antagonistic control of seed dormancy in rice by two bHLH transcription factors. Nature Genetics 54, 1972-1982.

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Luo, G., Najafi, J., Correia, P.M.P., Trinh, M.D.L., Chapman, E.A., Østerberg, J.T., Thomsen, H.C., Pedas, P.R., Larson, S., Gao, C., et al. (2022). Accelerated Domestication of New Crops: Yield is Key. Plant Cell Physiology 63, 1624-1640.

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Zong, Y., Liu, Y., Xue, C., Li, B., Li, X., Wang, Y., Li, J., Liu, G., Huang, X., Cao, X., et al. (2022). Author Correction: An engineered prime editor with enhanced editing efficiency in plants. Nature Biotechnology 40, 1412.

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Zhang, R., Chen, S., Meng, X., Chai, Z., Wang, D., Yuan, Y., Chen, K., Jiang, L., Li, J., and Gao, C. (2022). Erratum to: Generating broad-spectrum tolerance to ALS-inhibiting herbicides in rice by base editing. Science China Life sciences 65, 1270.

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Luo, J., Rouse, M.N., Hua, L., Li, H., Li, B., Li, T., Zhang, W., Gao, C., Wang, Y., Dubcovsky, J., et al. (2022). Identification and characterization of Sr22b, a new allele of the wheat stem rust resistance gene Sr22 effective against the Ug99 race group. Plant biotechnology journal 20, 554-563.

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Luo, G., Li, B., and Gao, C. (2022). Protoplast Isolation and Transfection in Wheat. Methods in molecular biology 2464, 131-141.

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Liu, G., Lin, Q., Jin, S., and Gao, C. (2022). The CRISPR-Cas toolbox and gene editing technologies. Molecular cell 82, 333-347.

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Wang, N., Fan, X., He, M., Hu, Z., Tang, C., Zhang, S., Lin, D., Gan, P., Wang, J., Huang, X., et al. (2022). Transcriptional repression of TaNOX10 by TaWRKY19 compromises ROS generation and enhances wheat susceptibility to stripe rust. Plant Cell 34, 1784-1803.

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Wei, W.S., and Gao, C.X. (2022). Gene editing: from technologies to applications in research and beyond. Science China-Life Sciences 65, 657-659.

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2021

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Zhang, R., Chen, S., Meng, X., Chai, Z., Wang, D., Yuan, Y., Chen, K., Jiang, L., Li, J., and Gao, C. (2021). Generating broad-spectrum tolerance to ALS-inhibiting herbicides in rice by base editing. Science China Life sciences 64, 1624-1633.

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Guo, M., Wang, Q., Zong, Y., Nian, J., Li, H., Li, J., Wang, T., Gao, C., and Zuo, J. (2021). Genetic manipulations of TaARE1 boost nitrogen utilization and grain yield in wheat. Journal of genetics and genomics 48, 950-953.

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Luo, G., Shen, L., Zhao, S., Li, R., Song, Y., Song, S., Yu, K., Yang, W., Li, X., Sun, J., et al. (2021). Genome-wide identification of seed storage protein gene regulators in wheat through coexpression analysis. The Plant journal 108, 1704-1720.

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Luo, G., Shen, L., Song, Y., Yu, K., Ji, J., Zhang, C., Yang, W., Li, X., Sun, J., Zhan, K., et al. (2021). The MYB family transcription factor TuODORANT1 from Triticum urartu and the homolog TaODORANT1 from Triticum aestivum inhibit seed storage protein synthesis in wheat. Plant biotechnology journal 19, 1863-1877.

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Lin, Q., Zhu, Z., Liu, G., Sun, C., Lin, D., Xue, C., Li, S., Zhang, D., Gao, C., Wang, Y., et al. (2021). Genome editing in plants with MAD7 nuclease. Journal of genetics and genomics 48, 444-451.

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Li, T., Hu, J., Sun, Y., Li, B., Zhang, D., Li, W., Liu, J., Li, D., Gao, C., Zhang, Y., et al. (2021). Highly efficient heritable genome editing in wheat using an RNA virus and bypassing tissue culture. Molecular plant 14, 1787-1798.

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Jin, S., Gao, Q., and Gao, C. (2021). An unbiased method for evaluating the genome-wide specificity of base editors in rice. Nature protocols 16, 431-457.

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Gao, C., and Chen, J. (2021). CRISPR Adventures in China. The CRISPR journal 4, 304-306.

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Gao, C. (2021). Genome engineering for crop improvement and future agriculture. Cell 184, 1621-1635.

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Xu, Y., Lin, Q., Li, X., Wang, F., Chen, Z., Wang, J., Li, W., Fan, F., Tao, Y., Jiang, Y., et al. (2021). Fine-tuning the amylose content of rice by precise base editing of the Wx gene. Plant biotechnology journal 19, 11-13.

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Xu, S., Dong, Q., Deng, M., Lin, D., Xiao, J., Cheng, P., Xing, L., Niu, Y., Gao, C., Zhang, W., et al. (2021). The vernalization-induced long non-coding RNA VAS functions with the transcription factor TaRF2b to promote TaVRN1 expression for flowering in hexaploid wheat. Molecular plant 14, 1525-1538.

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Qiu, F., Xing, S., Xue, C., Liu, J., Chen, K., Chai, T., and Gao, C. (2021). Transient expression of a TaGRF4-TaGIF1 complex stimulates wheat regeneration and improves genome editing. Science China Life sciences 65, 731-738.

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2020

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Si, X., Zhang, H., Wang, Y., Chen, K., and Gao, C. (2020). Manipulating gene translation in plants by CRISPR-Cas9-mediated genome editing of upstream open reading frames. Nature protocols 15, 338-363.

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DeHaan, L., Larson, S., López-Marqués, R.L., Wenkel, S., Gao, C., and Palmgren, M. (2020). Roadmap for Accelerated Domestication of an Emerging Perennial Grain Crop. Trends in plant science 25, 525-537.

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López-Marqués, R.L., Nørrevang, A.F., Ache, P., Moog, M., Visintainer, D., Wendt, T., Østerberg, J.T., Dockter, C., Jørgensen, M.E., Salvador, A.T., et al. (2020). Prospects for the accelerated improvement of the resilient crop quinoa. Journal of experimental botany 71, 5333-5347.

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Li, C., Zong, Y., Jin, S., Zhu, H., Lin, D., Li, S., Qiu, J.L., Wang, Y., and Gao, C. (2020). SWISS: multiplexed orthogonal genome editing in plants with a Cas9 nickase and engineered CRISPR RNA scaffolds. Genome biology 21, 141.

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Wang, H., Sun, S., Ge, W., Zhao, L., Hou, B., Wang, K., Lyu, Z., Chen, L., Xu, S., Guo, J., et al. (2020). Horizontal gene transfer of Fhb7 from fungus underlies Fusarium head blight resistance in wheat. Science368, 844-851.

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Zhang, Y., Pribil, M., Palmgren, M., and Gao, C. (2020). A CRISPR way for accelerating improvement of food crops. Nature Food 1, 200-205.

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Chen, K., Gao, C. (2020). Genome-edited crops: how to move them from laboratory to market. Frontiers of Agricultural Science and Engineering 7, 181–187.

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Zhang, Y., Ran, Y., Nagy, I., Lenk, I., Qiu, J.L., Asp, T., Jensen, C.S., and Gao, C. (2020). Targeted mutagenesis in ryegrass (Lolium spp.) using the CRISPR/Cas9 system. Plant biotechnology journal 18, 1854-1856.

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Fan, R., Chai, Z., Xing, S., Chen, K., Qiu, F., Chai, T., Qiu, J.L., Zhang, Z., Zhang, H., and Gao, C. (2020). Shortening the sgRNA-DNA interface enables SpCas9 and eSpCas9(1.1) to nick the target DNA strand. Science China Life sciences 63, 1619-1630.

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Zhu, H., Li, C., and Gao, C. (2020). Applications of CRISPR-Cas in agriculture and plant biotechnology. Nature reviews Molecular cell biology 21, 661-677.

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Xing, S., Chen, K., Zhu, H., Zhang, R., Zhang, H., Li, B., and Gao, C. (2020). Fine-tuning sugar content in strawberry. Genome biology 21, 230.

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Xie, H., Ge, X., Yang, F., Wang, B., Li, S., Duan, J., Lv, X., Cheng, C., Song, Z., Liu, C., et al. (2020). High-fidelity SaCas9 identified by directional screening in human cells. PLoS biology 18, e3000747.

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Wang, S., Zong, Y., Lin, Q., Zhang, H., Chai, Z., Zhang, D., Chen, K., Qiu, J.L., and Gao, C. (2020). Precise, predictable multi-nucleotide deletions in rice and wheat using APOBEC-Cas9. Nature biotechnology 38, 1460-1465.

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Cao, X., Dong, Z., Tian, D., Dong, L., Qian, W., Liu, J., Liu, X., Qin, H., Zhai, W., Gao, C., et al. (2020). Development and characterization of marker-free and transgene insertion site-defined transgenic wheat with improved grain storability and fatty acid content. Plant biotechnology journal 18, 129-140.

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Cao, S., Luo, X., Xie, L., Gao, C., Wang, D., Holt, B.F., 3rd, Lin, H., Chu, C., and Xia, X. (2020). The florigen interactor BdES43 represses flowering in the model temperate grass Brachypodium distachyon. The Plant journal 102, 262-275.

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Jiang, Y.Y., Chai, Y.P., Lu, M.H., Han, X.L., Lin, Q., Zhang, Y., Zhang, Q., Zhou, Y., Wang, X.C., Gao, C., et al. (2020). Prime editing efficiently generates W542L and S621I double mutations in two ALS genes in maize. Genome biology 21, 257.

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2019

Chen, K., Wang, Y., Zhang, R., Zhang, H., and Gao, C. (2019). CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture. Annual review of plant biology 70, 667-697.

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Li, J., and Gao, C. (2019). Preface to the special topic on genome editing research in China. National science review 6, 389-390.

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Liu, Q., Wang, C., Jiao, X., Zhang, H., Song, L., Li, Y., Gao, C., and Wang, K. (2019). Hi-TOM: a platform for high-throughput tracking of mutations induced by CRISPR/Cas systems. Science China Life sciences 62, 1-7.

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Zong, Y., Gao, C. (2019). Progress on base editing systems. Hereditas 41, 777-800.

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Ji, X., Wang, D., and Gao, C. (2019). CRISPR editing-mediated antiviral immunity: a versatile source of resistance to combat plant virus infections. Science China Life sciences 62, 1246-1249.


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Gao, C. (2019). Precision plant breeding using genome editing technologies. Transgenic research 28, 53-55.

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Hickey, L.T., A, N.H., Robinson, H., Jackson, S.A., Leal-Bertioli, S.C.M., Tester, M., Gao, C., Godwin, I.D., Hayes, B.J., and Wulff, B.B.H. (2019). Breeding crops to feed 10 billion. Nature biotechnology 37, 744-754.

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Liu, G., Yin, K., Zhang, Q., Gao, C., and Qiu, J.L. (2019). Modulating chromatin accessibility by transactivation and targeting proximal dsgRNAs enhances Cas9 editing efficiency in vivo. Genome biology 20, 145.

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He, X., Wang, Y., Yang, F., Wang, B., Xie, H., Gu, L., Zhao, T., Liu, X., Zhang, D., Ren, Q., et al. (2019). Boosting activity of high-fidelity CRISPR/Cas9 variants using a tRNA(Gln)-processing system in human cells. The Journal of biological chemistry 294, 9308-9315.

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Zhang, R., Liu, J., Chai, Z., Chen, S., Bai, Y., Zong, Y., Chen, K., Li, J., Jiang, L., and Gao, C. (2019). Generation of herbicide tolerance traits and a new selectable marker in wheat using base editing. Nature plants 5, 480-485.

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2018

Li, T., Yang, X., Yu, Y., Si, X., Zhai, X., Zhang, H., Dong, W., Gao, C., and Xu, C. (2018). Domestication of wild tomato is accelerated by genome editing. Nature biotechnology 36, 1160-1163.


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Guo, L., Cao, X., Liu, Y., Li, J., Li, Y., Li, D., Zhang, K., Gao, C., Dong, A., and Liu, X. (2018). A chromatin loop represses WUSCHEL expression in Arabidopsis. The Plant journal 94, 1083-1097.

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Li, C., Zong, Y., Wang, Y., Jin, S., Zhang, D., Song, Q., Zhang, R., and Gao, C. (2018). Expanded base editing in rice and wheat using a Cas9-adenosine deaminase fusion. Genome biology 19, 59.

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Xue, C., Zhang, H., Lin, Q., Fan, R., and Gao, C. (2018). Manipulating mRNA splicing by base editing in plants. Science China Life sciences 61, 1293-1300.

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Ji, X., Si, X., Zhang, Y., Zhang, H., Zhang, F., and Gao, C. (2018). Conferring DNA virus resistance with high specificity in plants using virus-inducible genome-editing system. Genome biology 19, 197.

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Zhang, Y., Massel, K., Godwin, I.D., and Gao, C. (2018). Applications and potential of genome editing in crop improvement. Genome biology 19, 210.

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Liang, Z., Chen, K., Yan, Y., Zhang, Y., and Gao, C. (2018). Genotyping genome-edited mutations in plants using CRISPR ribonucleoprotein complexes. Plant biotechnology journal 16, 2053-2062.

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Meng, X., Hu, X., Liu, Q., Song, X., Gao, C., Li, J., and Wang, K. (2018). Robust genome editing of CRISPR-Cas9 at NAG PAMs in rice. Science China Life sciences 61, 122-125.

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Bhowmik, P., Ellison, E., Polley, B., Bollina, V., Kulkarni, M., Ghanbarnia, K., Song, H., Gao, C., Voytas, D.F., and Kagale, S. (2018). Targeted mutagenesis in wheat microspores using CRISPR/Cas9. Scientific reports 8, 6502.

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2017

Gil-Humanes, J., Wang, Y., Liang, Z., Shan, Q., Ozuna, C.V., Sánchez-León, S., Baltes, N.J., Starker, C., Barro, F., Gao, C., et al. (2017). High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9. The Plant journal 89, 1251-1262.

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Zhang, Y., Bai, Y., Wu, G., Zou, S., Chen, Y., Gao, C., and Tang, D. (2017). Simultaneous modification of three homoeologs of TaEDR1 by genome editing enhances powdery mildew resistance in wheat. The Plant journal 91, 714-724.

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Li, J., Zhang, H., Si, X., Tian, Y., Chen, K., Liu, J., Chen, H., and Gao, C. (2017). Generation of thermosensitive male-sterile maize by targeted knockout of the ZmTMS5 gene. Journal of genetics and genomics 44, 465-468.

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Zhang, D., Zhang, H., Li, T., Chen, K., Qiu, J.L., and Gao, C. (2017). Perfectly matched 20-nucleotide guide RNA sequences enable robust genome editing using high-fidelity SpCas9 nucleases. Genome biology 18, 191.

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Wang, C., Liu, W., Wang, G., Li, J., Dong, L., Han, L., Wang, Q., Tian, J., Yu, Y., Gao, C., et al. (2017). KTN80 confers precision to microtubule severing by specific targeting of katanin complexes in plant cells. The EMBO journal 36, 3435-3447.

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Meng, X., Yu, H., Zhang, Y., Zhuang, F., Song, X., Gao, S., Gao, C., and Li, J. (2017). Construction of a Genome-Wide Mutant Library in Rice Using CRISPR/Cas9. Molecular plant 10, 1238-1241.

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Yin, K., Gao, C., and Qiu, J.L. (2017). Progress and prospects in plant genome editing. Nature plants 3, 17107.

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Ran, Y., Liang, Z., and Gao, C. (2017). Current and future editing reagent delivery systems for plant genome editing. Science China Life sciences 60, 490-505.

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Wang, Y., Zong, Y., and Gao, C. (2017). Targeted Mutagenesis in Hexaploid Bread Wheat Using the TALEN and CRISPR/Cas Systems. Methods in molecular biology 1679, 169-185.

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Zhang, Y., and Gao, C. (2017). Recent advances in DNA-free editing and precise base editing in plants. Emerging topics in life sciences 1, 161-168.

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Wang, Y., Yu, H., Tian, C., Sajjad, M., Gao, C., Tong, Y., Wang, X., and Jiao, Y. (2017). Transcriptome Association Identifies Regulators of Wheat Spike Architecture. Plant physiology 175, 746-757.

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Tu, M., Lin, L., Cheng, Y., He, X., Sun, H., Xie, H., Fu, J., Liu, C., Li, J., Chen, D., et al. (2017). A 'new lease of life': FnCpf1 possesses DNA cleavage activity for genome editing in human cells. Nucleic acids research 45, 11295-11304.

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2016

Liang, Z., Zong, Y., and Gao, C. (2016). An Efficient Targeted Mutagenesis System Using CRISPR/Cas in Monocotyledons. Current protocols in plant biology 1, 329-344.

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Zhang, Y., Li, J., and Gao, C. (2016). Generation of Stable Transgenic Rice (Oryza sativa L.) by Agrobacterium-Mediated Transformation. Current protocols in plant biology 1, 235-246.

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Li, X., Xia, K., Liang, Z., Chen, K., Gao, C., and Zhang, M. (2016). MicroRNA393 is involved in nitrogen-promoted rice tillering through regulation of auxin signal transduction in axillary buds. Scientific reports 6, 32158.

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Jiao, R., and Gao, C. (2016). The CRISPR/Cas9 Genome Editing Revolution. Journal of genetics and genomics 43, 227-228.

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Li, J., Meng, X., Zong, Y., Chen, K., Zhang, H., Liu, J., Li, J., and Gao, C. (2016a). Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9. Nature plants 2, 16139.

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2015

Gao, C. (2015). Genome editing in crops: from bench to field. National science review 2, 13-15.

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Chen, K., and Gao, C. (2015). Targeted Gene Mutation in Plants. Somatic Genome Manipulation: Advances, Methods, and Applications pp. 253-272.

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Chen, K., and Gao, C. (2015). Developing CRISPR Technology in Major Crop Plants. Advances in New Technology for Targeted Modification of Plant Genomes pp. 145-159.

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Zhang, K., Liu, J., Zhang, Y., Yang, Z., and Gao, C. (2015). Biolistic genetic transformation of a wide range of Chinese elite wheat (Triticum aestivum L.) varieties. Journal of genetics and genomics 42, 39-42.

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Shan, Q., Zhang, Y., Chen, K., Zhang, K., and Gao, C. (2015). Creation of fragrant rice by targeted knockout of the OsBADH2 gene using TALEN technology. Plant biotechnology journal 13, 791-800.

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Wang, S., Li, S., Liu, Q., Wu, K., Zhang, J., Wang, S., Wang, Y., Chen, X., Zhang, Y., Gao, C., et al. (2015). The OsSPL16-GW7 regulatory module determines grain shape and simultaneously improves rice yield and grain quality. Nature genetics 47, 949-954.

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Ji, X., Zhang, H., Zhang, Y., Wang, Y., and Gao, C. (2015). Establishing a CRISPR-Cas-like immune system conferring DNA virus resistance in plants. Nature plants 1, 15144.

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Shan, Q.W., and Gao, C.X. (2015). Research progress of genome editing and derivative technologies in plants. Hereditas 37, 953-973.

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2014

Chen, K., Shan, Q., and Gao, C. (2014). An efficient TALEN mutagenesis system in rice. Methods 69, 2-8.

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Chen, K., and Gao, C. (2014). Targeted genome modification technologies and their applications in crop improvements. Plant cell reports 33, 575-583.

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Xiao, J., Xu, S., Li, C., Xu, Y., Xing, L., Niu, Y., Huan, Q., Tang, Y., Zhao, C., Wagner, D., et al. (2014). O-GlcNAc-mediated interaction between VER2 and TaGRP2 elicits TaVRN1 mRNA accumulation during vernalization in winter wheat. Nature communications 5, 4572.

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Voytas, D.F., and Gao, C. (2014). Precision genome engineering and agriculture: opportunities and regulatory challenges. PLoS biology 12, e1001877.

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2013

Gao, C., and Nielsen, K.K. (2013). Comparison between Agrobacterium-mediated and direct gene transfer using the gene gun. Methods in molecular biology 940, 3-16.

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Chen, K., and Gao, C. (2013). TALENs: customizable molecular DNA scissors for genome engineering of plants. Journal of genetics and genomics 40, 271-279.

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Shan, Q., Wang, Y., Chen, K., Liang, Z., Li, J., Zhang, Y., Zhang, K., Liu, J., Voytas, D.F., Zheng, X., et al. (2013). Rapid and efficient gene modification in rice and Brachypodium using TALENs. Molecular plant 6, 1365-1368.

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